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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3697235_3697721_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

3697235 - 3697721

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGAAGG

5'SS Class:

major

3'SS Sequence:

AATCTGGTGAAAG|C

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TAATCTTTAACC

Flanking Amino Acid:

AAPSGPVTVIAEWKPEKGIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

62.8

43.3

Major BPS

74.7

0.61

65.9

40.9

Major PPT

49.3

-0

1.2

48.1

43.4

Minor 5ss

27.9

-2.5

2.8

32.4

41.9

Minor BPS

80.6

0.94

80.63

33.4

Associated Gene:

Gene:

TSEN54

Ensembl Gene ID:

ENSAPLG00000009419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030751

3697159 - 3700645

3487