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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3699886_3700136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3699886 - 3700136

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

CTGAAGTAAACT

Flanking Amino Acid:

QEEMSLSHYQVFSHLKQLGY

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

67.5

40.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

65.6

0.35

63.2

37.4

Minor 5ss

40.2

-1.1

2.7

49.2

47.1

Minor BPS

42.2

-0.5

2.4

61.1

48.2

Associated Gene:

Gene:

TSEN54

Ensembl Gene ID:

ENSAPLG00000009419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032139

3692044 - 3704924

12881