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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3700642_3701836_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3700642 - 3701836

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GTGGAGATCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAAAAAA

U12 Branch Point Sequence:

ACCCCCAAAAAA

Flanking Amino Acid:

ERKRRRSSSPGCLPLDEKPL

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

73.4

43.3

Major BPS

46.5

-0.2

49.3

29.7

Major PPT

55.5

0.12

1.1

43.5

46.2

Minor 5ss

35.4

-1.7

3.2

40.5

45.5

Minor BPS

42.8

-0.5

1.9

49.36

41.1

Associated Gene:

Gene:

TSEN54

Ensembl Gene ID:

ENSAPLG00000009419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043790

3696303 - 3704924

8622