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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3702986_3703577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3702986 - 3703577

Intron Length:

592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTTAGTAGC

5'SS Class:

major

3'SS Sequence:

CCCTCTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

AATCCCATAAGT

Flanking Amino Acid:

QPSHILDGASRLQEDSGSLK

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

68.6

42.4

Major BPS

76.9

0.67

1.2

31.9

Major PPT

77.1

0.61

0.7

72.5

25.7

Minor 5ss

32.9

-1.9

2.5

39.7

38.6

Minor BPS

54.8

0.23

1.9

74.63

41.3

Associated Gene:

Gene:

TSEN54

Ensembl Gene ID:

ENSAPLG00000009419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032139

3692044 - 3704924

12881

ENSAPLT00000009822

3692044 - 3704924

12881