Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_3735965_3736716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3735965 - 3736716

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAG

U12 Branch Point Sequence:

TTTCTGTTGACA

Flanking Amino Acid:

LLVVSEEQFKVFTLPKVSSK

Intron Amino Acid Position:

821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.4

20.6

Major BPS

52.1

0.05

1.6

63.1

44.4

Major PPT

79.1

0.65

75.8

38.2

Minor 5ss

34.8

-1.7

2.8

44.9

43.2

Minor BPS

57.6

0.23

2.1

75.39

35.8

Associated Gene:

Gene:

LLGL2

Ensembl Gene ID:

ENSAPLG00000009521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010037

3715452 - 3739565

24114