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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3772970_3778481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3772970 - 3778481

Intron Length:

5512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCAACTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TCATCTTTAAGG

Flanking Amino Acid:

YSPLSLPRMASRSVILRPLS

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

74.7

0.61

65.9

40.9

Major PPT

62.7

0.29

1.1

61.8

32.6

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

62.4

0.25

1.7

63.57

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011346

3769817 - 3797236

27420