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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3778848_3780278_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3778848 - 3780278

Intron Length:

1431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TGAATGCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

TCTCCCTGAATG

Flanking Amino Acid:

QESALEINKLILRFIGDQNL

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

31.6

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

65.1

0.34

55.1

45.4

Minor 5ss

32.2

-2

3.5

44.1

44.7

Minor BPS

63.4

0.28

1.5

65.83

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011346

3769817 - 3797236

27420

ENSAPLT00000027804

3777387 - 3799805

22419