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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3780515_3780597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3780515 - 3780597

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

ACATGCTAAAGG

Flanking Amino Acid:

PSPALEKPLLKFVSDHGMDG

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

67.1

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

0.81

0.6

80.7

31.3

Minor 5ss

33.4

-1.9

3.2

40.1

Minor BPS

42.6

-0.7

2.3

45.84

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027804

3777387 - 3799805

22419

ENSAPLT00000011346

3769817 - 3797236

27420