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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3787851_3789359_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3787851 - 3789359

Intron Length:

1509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GGCTCTTCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTCTTCTCACCC

Flanking Amino Acid:

NQDSQEFTAKEDDGIKTQLY

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

0.87

0.8

85.6

Major PPT

63.3

0.3

0.9

58.4

37.2

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

0.17

1.9

69.77

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027804

3777387 - 3799805

22419

ENSAPLT00000011346

3769817 - 3797236

27420