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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3789455_3790027_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3789455 - 3790027

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGCTG

5'SS Class:

major

3'SS Sequence:

CCTCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTGTATTTATCC

Flanking Amino Acid:

PAWKIFLRKEVFYPKENFSH

Intron Amino Acid Position:

841

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

57.8

46.6

Major BPS

88.7

0.96

0.8

36.5

Major PPT

82.1

0.72

0.7

76.1

25.9

Minor 5ss

32.6

-2

3.7

46.8

48.5

Minor BPS

58.5

0.25

1.8

70.96

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027804

3777387 - 3799805

22419

ENSAPLT00000011346

3769817 - 3797236

27420