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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3790088_3790314_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3790088 - 3790314

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATGGAAG

Flanking Amino Acid:

PYCLNLLCEQIMRDTFSNSC

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

85.3

0.79

0.7

80.2

25.1

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

46.8

-0.4

59.87

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027804

3777387 - 3799805

22419

ENSAPLT00000011346

3769817 - 3797236

27420