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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3790391_3790926_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3790391 - 3790926

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAATTAAC

5'SS Class:

major

3'SS Sequence:

GCGGAATTTCGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TGCTTTGTATCC

Flanking Amino Acid:

EEKRKMKDLLIGNDVQSIQE

Intron Amino Acid Position:

886

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.1

67.9

37.3

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

46.3

-0.2

1.7

42.9

46.4

Minor 5ss

37.4

-1.4

2.7

42.4

38.4

Minor BPS

45.4

-0.3

2.2

57.65

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027804

3777387 - 3799805

22419

ENSAPLT00000011346

3769817 - 3797236

27420