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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3791888_3792023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3791888 - 3792023

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

AAGATTTGACCT

Flanking Amino Acid:

VETFIQELRQDTNYVVALRS

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

83.4

0.75

0.8

76.2

37.8

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

44.7

-0.3

1.6

56.51

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011346

3769817 - 3797236

27420

ENSAPLT00000027804

3777387 - 3799805

22419