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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3792136_3792464_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3792136 - 3792464

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GGTTCCTGACTC

Flanking Amino Acid:

QLLPMQGLEPGWQFGSTGGR

Intron Amino Acid Position:

1046

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

82.9

0.74

0.8

80.3

31.7

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

54.5

0.12

1.8

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027804

3777387 - 3799805

22419

ENSAPLT00000011346

3769817 - 3797236

27420