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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3792676_3794598_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3792676 - 3794598

Intron Length:

1923

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCT|GCCAGGATA

5'SS Class:

weak_major

3'SS Sequence:

GAGCTGGATGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

GTCACTTTGAGC

Flanking Amino Acid:

ARGYGCVLWDLRNCLVPRCP

Intron Amino Acid Position:

759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.5

64.7

39.5

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

43.4

-0.3

1.7

39.1

43.6

Minor 5ss

23.8

-3

41.3

44.8

Minor BPS

49.8

-0

1.7

58.73

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027804

3777387 - 3799805

22419