Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_3803095_3803344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3803095 - 3803344

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCACA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TGCTCTTTATCT

Flanking Amino Acid:

FYKGGKFASKDLFKGFARHL

Intron Amino Acid Position:

990

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

40.2

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

82.1

0.72

0.7

76.4

25.6

Minor 5ss

38.3

-1.3

3.1

49.3

46.7

Minor BPS

67.5

0.63

1.6

80.3

41.9

Associated Gene:

Gene:

RECQL5

Ensembl Gene ID:

ENSAPLG00000011106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011606

3802807 - 3843773

40967