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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3840868_3864786_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3840868 - 3864786

Intron Length:

23919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTACCCCCC

5'SS Class:

weak_major

3'SS Sequence:

TCACTGTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

ATATCCTTCACT

Flanking Amino Acid:

EDEEASRQSVKLIPGLLSTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.3

45.5

43.1

Major BPS

73.9

0.59

30.2

Major PPT

67.8

0.4

1.1

44.5

Minor 5ss

45.3

-0.5

3.1

60.4

38.3

Minor BPS

73.8

0.83

1.7

87.51

37.6

Associated Gene:

Gene:

SAP30BP

Ensembl Gene ID:

ENSAPLG00000011643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012147

3840477 - 3870847

30371