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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3868349_3868810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3868349 - 3868810

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

ATAGACCTAATA

Flanking Amino Acid:

IDELGTNYPKDMFDPHGWSE

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.3

Major BPS

75.8

0.64

65.8

Major PPT

89.6

0.89

0.6

89.5

19.2

Minor 5ss

31.6

-2.1

3.2

41.1

45.6

Minor BPS

47.9

-0.1

1.9

60.57

39.2

Associated Gene:

Gene:

SAP30BP

Ensembl Gene ID:

ENSAPLG00000011643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012147

3840477 - 3870847

30371