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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3883211_3883478_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

3883211 - 3883478

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-CG

5'SS Sequence:

AAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCCCCG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTTTCCTGCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

38.9

-0.6

3.1

49.4

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

66.9

0.61

1.9

88.83

36.2

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043