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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3885170_3885520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3885170 - 3885520

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TGCTCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGAGCAT

U12 Branch Point Sequence:

CCTTGCTGGAGC

Flanking Amino Acid:

SSPQTDMRPAKLREPWNNAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

40.1

Major BPS

42.2

-0.4

1.5

45.5

47.5

Major PPT

77.2

0.61

0.8

37.1

Minor 5ss

28.4

-2.5

3.1

31.4

36.6

Minor BPS

-0.4

2.2

53.72

44.7

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012353

3884466 - 3903161

18696

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043