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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3885693_3885976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3885693 - 3885976

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCATCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAC

U12 Branch Point Sequence:

TTCTCCCCATCT

Flanking Amino Acid:

DAILQTAVCKDDIGWRKDST

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

53.9

0.1

1.2

55.8

37.4

Major PPT

70.9

0.47

0.8

64.7

30.4

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

49.8

0.07

2.1

77.09

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012353

3884466 - 3903161

18696

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043