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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3887002_3887130_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3887002 - 3887130

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGTG

5'SS Class:

major

3'SS Sequence:

TGCCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAC

U12 Branch Point Sequence:

AGGGCCATAATC

Flanking Amino Acid:

IVELLRMAFERIRSKMDIRA

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

67.8

43.5

Major BPS

70.5

0.51

33.1

Major PPT

67.9

0.4

0.8

58.1

33.2

Minor 5ss

38.4

-1.3

3.7

49.2

Minor BPS

50.3

-0

1.7

58.4

40.6

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696

ENSAPLT00000038616

3883119 - 3903644

20526