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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3887516_3887945_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3887516 - 3887945

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCCCAC

U12 Branch Point Sequence:

CCAGCAGCACCT

Flanking Amino Acid:

VVCDVCPCEQHAVPSSPKCN

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.4

37.4

Major BPS

45.4

-0.2

1.2

49.9

36.8

Major PPT

0.74

0.7

76.9

Minor 5ss

30.8

-2.2

3.8

47.7

Minor BPS

33.1

-1.2

2.3

45.41

45.7

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696