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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3888023_3888173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3888023 - 3888173

Intron Length:

151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

TCCTCTCTATCA

Flanking Amino Acid:

ICGQCFCHAGWQGDTCDCSL

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

84.3

33.3

Major BPS

58.6

0.22

1.5

38.9

Major PPT

78.1

0.63

0.8

77.6

29.7

Minor 5ss

38.3

-1.3

3.4

54.5

43.9

Minor BPS

49.5

-0

1.9

63.28

43.5

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696