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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3889786_3890073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3889786 - 3890073

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

CTGCCCTGCAGT

Flanking Amino Acid:

NATVQVQKKKECPPGNFLWL

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

79.7

0.67

0.8

73.3

31.6

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

44.5

-0.3

2.2

61.86

47.7

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012353

3884466 - 3903161

18696

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043