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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3890181_3890444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3890181 - 3890444

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

TGTTTGGTCATG

Flanking Amino Acid:

LCWRFCACCKACLALLPCCA

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

77.8

0.63

0.9

70.2

40.7

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

38.1

-1

2.7

50.64

44.5

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012353

3884466 - 3903161

18696

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043