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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3891140_3891416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3891140 - 3891416

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGGGCC

5'SS Class:

major

3'SS Sequence:

TTGCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TGGGGATAAACC

Flanking Amino Acid:

EQLRKEVEENLNDIYKHIPG

Intron Amino Acid Position:

752

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.3

68.8

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

0.74

0.8

77.3

31.4

Minor 5ss

31.9

-2.1

3.5

41.5

38.6

Minor BPS

41.4

-0.6

2.2

51.7

45.3

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696