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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3891830_3891991_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3891830 - 3891991

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCGGCCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

TTTTTGTTCCCC

Flanking Amino Acid:

KFRVQPNSGKRQDHTIVDTV

Intron Amino Acid Position:

779

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

59.8

0.22

0.9

51.6

31.3

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

38.3

-0.9

3.8

69.02

43.1

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696