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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3893116_3893473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3893116 - 3893473

Intron Length:

358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCCA

5'SS Class:

major

3'SS Sequence:

CCTCCTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GTGCTCTGACCT

Flanking Amino Acid:

TRDLTAKDGRDYVFAEGDLI

Intron Amino Acid Position:

939

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

42.9

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

78.3

0.64

0.7

69.1

31.5

Minor 5ss

30.6

-2.2

3.2

31.7

42.2

Minor BPS

48.9

-0

1.8

66.75

43.6

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696