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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3895438_3895975_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3895438 - 3895975

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGAGCT

5'SS Class:

major

3'SS Sequence:

CCTGTATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TGCACCTGTATT

Flanking Amino Acid:

VSYGLVNEDNIPIGPVKKVL

Intron Amino Acid Position:

1167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

66.6

37.3

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

80.3

0.68

0.9

76.8

36.3

Minor 5ss

35.3

-1.7

3.5

54.4

43.3

Minor BPS

48.7

-0

1.8

66.39

43.9

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696

ENSAPLT00000038616

3883119 - 3903644

20526