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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3896487_3897503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3896487 - 3897503

Intron Length:

1017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATCAT

U12 Branch Point Sequence:

TTGTCCCAAAAG

Flanking Amino Acid:

SKHPSVSDDSGSRWKYVQLL

Intron Amino Acid Position:

1272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

73.4

38.9

Major BPS

64.2

0.35

1.2

65.8

Major PPT

60.5

0.24

1.1

61.2

34.2

Minor 5ss

39.5

-1.2

53.1

44.1

Minor BPS

48.3

-0.2

2.2

61.37

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012353

3884466 - 3903161

18696