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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3896487_3898595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3896487 - 3898595

Intron Length:

2109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TCCTCTTCCACA

Flanking Amino Acid:

SKHPSVSDDSEHLLNGRVDF

Intron Amino Acid Position:

1272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

73.4

38.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

80.3

0.68

0.7

75.3

26.8

Minor 5ss

39.5

-1.2

53.1

44.1

Minor BPS

49.4

-0

62.68

44.2

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043