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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3898761_3899233_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3898761 - 3899233

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CGCTGCTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TTTCTCTTACGC

Flanking Amino Acid:

RDYSTMMMGHDYPGRPLPPI

Intron Amino Acid Position:

1394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

71.5

33.9

Major BPS

69.2

0.48

37.1

Major PPT

68.4

0.41

0.9

61.7

34.9

Minor 5ss

-2.5

33.3

41.7

Minor BPS

55.4

0.15

1.9

71.01

40.5

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038616

3883119 - 3903644

20526

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696