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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3900550_3901222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3900550 - 3901222

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCGTGTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

CGGCGCTGATGT

Flanking Amino Acid:

YSVQYQLLNGGEVHRLTIPN

Intron Amino Acid Position:

1502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

0.36

56.5

43.4

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

36.5

-0.9

2.1

46.59

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696

ENSAPLT00000038616

3883119 - 3903644

20526