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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3901830_3902268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3901830 - 3902268

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

TCTGTCTTCACC

Flanking Amino Acid:

MVTCEMLHGGGEPRNIYVEG

Intron Amino Acid Position:

1617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.6

36.7

Major BPS

77.5

0.68

79.6

Major PPT

75.9

0.58

0.9

37.3

Minor 5ss

36.1

-1.6

3.3

45.9

49.3

Minor BPS

0.23

1.9

69.02

43.1

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019403

3883119 - 3903161

20043

ENSAPLT00000012353

3884466 - 3903161

18696

ENSAPLT00000038616

3883119 - 3903644

20526