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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3902947_3903501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3902947 - 3903501

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

GCATCCTGAGCA

Flanking Amino Acid:

SHSSLDPHFSDGMLMTTQRV

Intron Amino Acid Position:

1643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

82.5

0.73

0.7

76.4

25.6

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

53.6

0.11

1.7

62.36

43.2

Associated Gene:

Gene:

ITGB4

Ensembl Gene ID:

ENSAPLG00000011722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038616

3883119 - 3903644

20526