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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3909313_3909724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3909313 - 3909724

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

TGGCGCTCAGCC

Flanking Amino Acid:

DYNGGFVLPMALQLGTVLVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

66.2

39.3

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

61.6

0.26

0.9

53.5

31.1

Minor 5ss

29.7

-2.3

3.5

37.8

42.4

Minor BPS

43.1

-0.5

2.1

53.13

Associated Gene:

Gene:

GALK1

Ensembl Gene ID:

ENSAPLG00000013366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020550

3907933 - 3909893

1961

ENSAPLT00000013916

3906235 - 3909893

3659