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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3938477_3944499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3938477 - 3944499

Intron Length:

6023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATTAG

5'SS Class:

major

3'SS Sequence:

TTTCTGTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

CAGTCCTAAAAT

Flanking Amino Acid:

MLDKSYLKEFRTEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

68.4

39.2

Major BPS

72.7

0.57

72.1

31.1

Major PPT

86.1

0.81

0.8

80.9

31.1

Minor 5ss

37.8

-1.4

3.1

48.8

47.4

Minor BPS

56.5

0.28

1.8

70.21

46.3

Associated Gene:

Gene:

UNK

Ensembl Gene ID:

ENSAPLG00000014891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015552

3938463 - 3966536

28074