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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3949786_3951630_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3949786 - 3951630

Intron Length:

1845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTACGTGGG

5'SS Class:

major

3'SS Sequence:

GTATTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

TGTGCTTGTATT

Flanking Amino Acid:

GPFCAFAHVEQPPLNEDLQQ

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.4

58.2

46.8

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

0.76

0.8

81.4

Minor 5ss

32.4

-2

3.3

38.6

40.4

Minor BPS

48.3

-0

1.9

68.97

42.6

Associated Gene:

Gene:

UNK

Ensembl Gene ID:

ENSAPLG00000014891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015552

3938463 - 3966536

28074