Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_3951774_3953041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3951774 - 3953041

Intron Length:

1268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTAGC

5'SS Class:

major

3'SS Sequence:

ATTTGTACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TGTTTTGTATTT

Flanking Amino Acid:

SSPHAPDLSNVWSKAGTLPT

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

70.9

39.3

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

73.8

0.54

0.9

67.9

38.2

Minor 5ss

44.6

-0.6

2.5

58.5

39.4

Minor BPS

47.8

-0

2.2

71.36

40.7

Associated Gene:

Gene:

UNK

Ensembl Gene ID:

ENSAPLG00000014891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015552

3938463 - 3966536

28074