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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3959355_3960502_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3959355 - 3960502

Intron Length:

1148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TATAACATAATT

Flanking Amino Acid:

PTSDTVESVIESALDDLDLN

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.1

78.8

38.3

Major BPS

77.9

0.69

78.3

31.3

Major PPT

69.5

0.44

1.1

65.3

41.1

Minor 5ss

49.4

-0

2.5

66.9

44.4

Minor BPS

55.5

0.25

1.8

76.53

39.4

Associated Gene:

Gene:

UNK

Ensembl Gene ID:

ENSAPLG00000014891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015552

3938463 - 3966536

28074