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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3962247_3964992_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3962247 - 3964992

Intron Length:

2746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTGAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATAAC

U12 Branch Point Sequence:

TGTGACATAACC

Flanking Amino Acid:

LGTSASHGSLGLNGMNSSIW

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

56.5

0.16

1.1

34.4

Major PPT

58.7

0.2

1.1

53.4

39.6

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

53.7

0.1

1.9

69.46

41.3

Associated Gene:

Gene:

UNK

Ensembl Gene ID:

ENSAPLG00000014891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015552

3938463 - 3966536

28074