Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_3974467_3974546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3974467 - 3974546

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

TCCTGTGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

CTCCCCTCATGT

Flanking Amino Acid:

RLSLTHPKPSGDEILRLLES

Intron Amino Acid Position:

1033

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

56.6

42.5

Major BPS

0.5

1.1

71.2

35.2

Major PPT

71.4

0.48

0.9

68.5

37.4

Minor 5ss

-2.4

3.7

40.8

45.9

Minor BPS

44.8

-0.3

2.1

61.24

48.2

Associated Gene:

Gene:

UNC13D

Ensembl Gene ID:

ENSAPLG00000015199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022639

3974360 - 3985237

10878

ENSAPLT00000015883

3974360 - 3987179

12820