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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3978427_3978738_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3978427 - 3978738

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCGAAC

5'SS Class:

major

3'SS Sequence:

CCTTCATCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

GGTGCCTTCATC

Flanking Amino Acid:

LYRMKDFLPERDGPLALSDF

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.2

64.1

42.1

Major BPS

0.62

1.1

77.2

Major PPT

75.1

0.56

0.8

68.6

30.6

Minor 5ss

-1.5

3.4

51.2

45.6

Minor BPS

0.11

1.9

63.58

42.3

Associated Gene:

Gene:

UNC13D

Ensembl Gene ID:

ENSAPLG00000015199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022639

3974360 - 3985237

10878

ENSAPLT00000015883

3974360 - 3987179

12820