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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3979097_3979337_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3979097 - 3979337

Intron Length:

241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GGCTCCTGACTC

Flanking Amino Acid:

CQKTWNKFFISTLKLNLFSI

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.7

44.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

84.6

0.78

0.7

80.4

24.9

Minor 5ss

42.4

-0.8

3.5

64.4

Minor BPS

-0.1

1.8

56.66

41.9

Associated Gene:

Gene:

UNC13D

Ensembl Gene ID:

ENSAPLG00000015199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022639

3974360 - 3985237

10878

ENSAPLT00000015883

3974360 - 3987179

12820