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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3979436_3979872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3979436 - 3979872

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAA

U12 Branch Point Sequence:

GCATCCAAAACA

Flanking Amino Acid:

KKQHLKPMVKSMEENGKALA

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

55.5

0.14

61.5

32.5

Major PPT

79.8

0.67

0.7

75.1

26.9

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

49.7

-0

62.04

43.6

Associated Gene:

Gene:

UNC13D

Ensembl Gene ID:

ENSAPLG00000015199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022639

3974360 - 3985237

10878

ENSAPLT00000015883

3974360 - 3987179

12820