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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3980295_3980579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3980295 - 3980579

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCTTGGTTCACA

Flanking Amino Acid:

RSTERLQSLLRVLVQMCKMK

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

71.5

33.9

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

77.8

0.63

0.9

71.5

38.4

Minor 5ss

-2.5

33.3

41.7

Minor BPS

45.7

-0.3

2.7

66.36

46.4

Associated Gene:

Gene:

UNC13D

Ensembl Gene ID:

ENSAPLG00000015199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022639

3974360 - 3985237

10878

ENSAPLT00000015883

3974360 - 3987179

12820