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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3983350_3983908_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3983350 - 3983908

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAATCTGC

5'SS Class:

weak_major

3'SS Sequence:

TTGTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCGTGAC

U12 Branch Point Sequence:

GCTGGCGTGACG

Flanking Amino Acid:

LNPVWDETFILEFEDTETAS

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.2

50.2

41.6

Major BPS

46.4

-0.2

1.4

36.7

42.3

Major PPT

80.2

0.68

0.9

73.7

36.9

Minor 5ss

47.2

-0.3

2.8

68.9

41.9

Minor BPS

-0.8

2.4

46.53

46.7

Associated Gene:

Gene:

UNC13D

Ensembl Gene ID:

ENSAPLG00000015199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022639

3974360 - 3985237

10878

ENSAPLT00000015883

3974360 - 3987179

12820