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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3984087_3984170_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3984087 - 3984170

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CGGGCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TGCTGCTCACAC

Flanking Amino Acid:

AKGILGKDVSGFSDPYCLLG

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

72.8

38.8

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

66.5

0.37

57.9

38.5

Minor 5ss

32.5

-2

3.2

40.9

45.4

Minor BPS

-0.6

2.2

52.41

44.6

Associated Gene:

Gene:

UNC13D

Ensembl Gene ID:

ENSAPLG00000015199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015883

3974360 - 3987179

12820

ENSAPLT00000022639

3974360 - 3985237

10878