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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3984238_3984486_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3984238 - 3984486

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

TGCTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGCAA

U12 Branch Point Sequence:

TTTCCCCTAGGT

Flanking Amino Acid:

VSMQRVKELESPIFCLKATV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

38.8

Major BPS

45.6

-0.2

1.4

51.7

43.9

Major PPT

86.6

0.82

0.7

84.6

30.4

Minor 5ss

31.2

-2.1

3.4

42.5

44.6

Minor BPS

49.8

0.06

2.2

78.52

43.3

Associated Gene:

Gene:

UNC13D

Ensembl Gene ID:

ENSAPLG00000015199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022639

3974360 - 3985237

10878

ENSAPLT00000015883

3974360 - 3987179

12820